List of Publications

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Journal Articles
Teaser

Markus Rempfler, Matthias Schneider, Giovanna D. Ielacqua, Xianghui Xiao, Stuart R. Stock, Jan Klohs, Gábor Székely, Bjoern Andres, and Bjoern H. Menze. Reconstructing cerebrovascular networks under local physiological constraints by integer programming. Medical Image Analysis, 25(1):86-94, 2015. Special Issue on the 2014 Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2014).

Medical Image Analysis-MICCAI'15 Best Paper Award

Teaser

Matthias Schneider, Sven Hirsch, Bruno Weber, Gábor Székely, and Bjoern H. Menze. Joint 3-D Vessel Segmentation and Centerline Extraction Using Oblique Hough Forests with Steerable Filters. Medical Image Analysis, 19(1):220-249, 2015.

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Matthias Schneider, Johannes Reichold, Bruno Weber, Gábor Székely, and Sven Hirsch. Tissue Metabolism Driven Arterial Tree Generation. Medical Image Analysis, 16(7):1397-1414, 2012. Special Issue on the 2011 Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2011).

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Sven Hirsch, Johannes Reichold, Matthias Schneider, Gábor Székely, and Bruno Weber. Topology and Hemodynamics of the Cortical Cerebrovascular System. Journal of Cerebral Blood Flow and Metabolism, 32(6):952-967, Apr 2012.

Refereed Conference Proceedings
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Matthias Schneider, Sven Hirsch, Bruno Weber, Gábor Székely, and Bjoern H. Menze. TGIF: Topological Gap In-Fill for Vascular Networks - A Generative Physiological Modeling Approach. In Polina Golland, Nobuhiko Hata, Christian Barillot, Joachim Hornegger, and Robert Howe, editors, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, volume 8674 of LNCS, pages 89-96. Springer Berlin/Heidelberg, 2014.

Teaser

Markus Rempfler, Matthias Schneider, Giovanna D. Ielacqua, Xianghui Xiao, Stuart R. Stock, Jan Klohs, Gábor Székely, Bjoern Andres, and Bjoern H. Menze. Extracting Vascular Networks under Physiological Constraints via Integer Programming. In Polina Golland, Nobuhiko Hata, Christian Barillot, Joachim Hornegger, and Robert Howe, editors, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, volume 8674 of LNCS, pages 506-513. Springer Berlin/Heidelberg, 2014.

Teaser

Matthias Schneider, Sven Hirsch, Bruno Weber, and Gábor Székely. Physiologically Based Construction of Optimized 3-D Arterial Tree Models. In Gabor Fichtinger, Anne Martel, and Terry Peters, editors, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, volume 6891 of LNCS, pages 404-411. Springer Berlin/Heidelberg, 2011.

MICCAI 2011 Student Travel Award

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Matthias Schneider, Hari Sundar, Rui Liao, Joachim Hornegger, and Chenyang Xu. Model-Based Respiratory Motion Compensation for Image-Guided Cardiac Interventions. In IEEE Conference on Computer Vision and Pattern Recognition (CVPR 2010), pages 2948-2954, Los Alamitos, CA, USA, Jun 2010. IEEE Computer Society.

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Matthias Schneider and Hari Sundar. Automatic global vessel segmentation and catheter removal using local geometry information and vector field integration. In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2010), pages 45-48, Apr 2010.

Refereed Workshop Proceedings
Teaser

Markus Rempfler, Matthias Schneider, Giovanna D. Ielacqua, Tim Sprenger, Xianghui Xiao, Stuart R. Stock, Jan Klohs, Gábor Székely, Bjoern Andres, and Bjoern H. Menze. Rekonstruktion zerebraler Gefässnetzwerke aus in-vivo μMRA mittels physiologischem Vorwissen zur lokalen Gefässgeometrie. In Heinz Handels, Thomas Martin Deserno, Hans-Peter Meinzer, and Thomas Tolxdorff, editors, Bildverarbeitung für die Medizin 2015, Informatik aktuell, pages 161-166. Springer Berlin/Heidelberg, 2015.

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Matthias Schneider and Thomas Schneider. Notes on Non-Interactive Secure Comparison in “Image Feature Extraction in the Encrypted Domain with Privacy-Preserving SIFT”. In ACM Workshop on Information Hiding and Multimedia Security (IH&MMSEC'14), pages 135-140, New York, NY, USA, Jun 2014. ACM.

Teaser

Matthias Schneider, Sven Hirsch, Gábor Székely, Bruno Weber, and Bjoern H. Menze. Oblique Random Forests for 3-D Vessel Detection Using Steerable Filters and Orthogonal Subspace Filtering. In Bjoern H. Menze, Georg Langs, Albert Montillo, Zhuowen Tu, and Antonio Criminisi, editors, MICCAI Workshop on Medical Computer Vision (MCV 2012), volume 7766 of LNCS, pages 142-154. Springer Berlin/Heidelberg, 2013.

Posters and Abstracts
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Alessandra Patera, Alberto Astolfo, Kevin S. Mader, Matthias Schneider, Bruno Weber, and Marco Stampanoni. Towards the reconstruction of the mouse brain vascular networks with high-resolution synchrotron radiation X-ray tomographic microscopy. Medical Applications of Synchrotron Radiation (MASR2015), 2015. Poster session.

Teaser

Alessandra Patera, Alberto Astolfo, Kevin S. Mader, Matthias Schneider, Bruno Weber, and Marco Stampanoni. Towards the reconstruction of the mouse brain vascular networks with high resolution synchrotron radiation X-ray tomographic microscopy. 2nd International Conference on Tomography of Materials and Structures (ICTMS), 2015. Poster session.

Teaser

Matthias Schneider. Model-Based Respiratory Motion Compensation for Image-Guided Cardiac Interventions. In Ludger Porada, editor, Informatiktage 2010 - Fachwissenschaftlicher Informatik-Kongress, volume S-9 of LNI, pages 219-222, Bonn, Mar 2010. GI.

Theses
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Matthias Schneider. Reconstruction of Complete Cerebrovascular Networks from High-Resolution Tomographic Data. PhD thesis, ETH Zurich, Zurich, Switzerland, Dec 2014.

ETH Medal Award 2016 for Outstanding Doctoral Thesis

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Matthias Schneider. Model-Based Respiratory Motion Compensation for Image-Guided Cardiac Interventions. Diplomarbeit (equivalent to master's thsis), University of Erlangen-Nuremberg, Germany, Jan 2010.

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Matthias Schneider. GPGPU for Accelerated GRAPPA Autocalibration in Magnetic Resonance Imaging. Studienarbeit (equivalent to bachelor's thesis), University of Erlangen-Nuremberg, Germany, Apr 2008.

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Matthias Schneider. Untersuchungen zu digitalisierten Signalen und deren Frequenzanalyse. Facharbeit aus der Physik, Leibniz-Gynasium Altdorf, 2004.

Patents
Teaser

Matthias Schneider, Hari Sundar, Rui Liao, and Chenyang Xu. Method of compensation of respiratory motion in cardiac imaging, 2010. US Patent App. 12/767,908.

infoAbstract pdfPaper/Preprint bibBibTeX doiDOI plusSupplementary Material slidesSlides posterPoster